BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005G03SP1|AL425417
(939 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1332 1753 0.0
>3x_Contig1332
Length = 6394
Score = 1753 bits (865), Expect = 0.0
Identities = 904/937 (96%)
Strand = Plus / Minus
Query: 1 gttaaatcgaagatcaaagaagtagtaatcgaaacaaaaaawaaaavagtcagcattgta 60
||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||
Sbjct: 6209 gttaaatcgaagatcaaagaagtagtaatcgaaacaaaaaataaaagagtcagctttgta 6150
Query: 61 ctgctccgtcagtatcagtttacgacacawaccataaacccttgcyactttattctatat 120
||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 6149 ctgctccgtcagtttcagtttacgacacataccataaacccttgctactttattctatat 6090
Query: 121 ytyggattgccattcyataacaattcatgcttctgagaaacttgttatcataaaacggtc 180
| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6089 tttggattgccattctataacaattcatgcttctgagaaacttgttatcataaaacggtc 6030
Query: 181 atttttaagcacagattgatgatcagtttcgaagttcaaaavaataaagtacgagawtag 240
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 6029 atttttaagcacagattgatgatcagtttcgaagttcaaaagaataaagtacgagattag 5970
Query: 241 cttttttgtttgaattgagataagagcaaccyatcatttgattgtytccgcygaagtatg 300
||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||
Sbjct: 5969 cttttttgtttgaattgagataagagcaacctatcatttgattgtttccgctgaagtatg 5910
Query: 301 acacttgaagaaaaaagtagtaccgtgattgcsgcggtcaatcagcctgccgttttatcc 360
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 5909 acacttgaagaaaaaagtagtaccgtgattgcggcggtcaatcagcctgccgttttatcc 5850
Query: 361 gahagtcgtgatcagataataaacsacatgaaggaacagaaaaggaccgahccygttgcy 420
|| ||||||||||||||||||||| ||||||||||||||||||||||||| || |||||
Sbjct: 5849 gatagtcgtgatcagataataaacgacatgaaggaacagaaaaggaccgatcctgttgct 5790
Query: 421 gttttgtatccagtacggtccaatgattccagtgcaagtycyagtcggaaaarcggctct 480
||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||
Sbjct: 5789 gttttgtatccagtacggtccaatgattccagtgcaagttctagtcggaaaagcggctct 5730
Query: 481 gatgctcgamacatggatgayacgataaasgacatcaaaccgaataatcctgcaagcmac 540
||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||| ||
Sbjct: 5729 gatgctcgaaacatggatgatacgataaaggacatcaaaccgaataatcctgcaagcaac 5670
Query: 541 cctgtctgtmagaactgttatacgtcaaccacaccgctctggcgtagggatgagcatggg 600
||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 5669 cctgtctgtaagaactgttatacgtcaactacaccgctctggcgtagggatgagcatggg 5610
Query: 601 tctgtcttgtgtaatgcatgtsgtctatytttsaagttgcacgggagaccaagacctatc 660
||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||
Sbjct: 5609 tctgtcttgtgtaatgcatgtggtctatttttgaagttgcacgggagaccaagacctatc 5550
Query: 661 agtttgaagactgacgttatcaaatcccgtaatcggaagtcatctcatcacgatagtccg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5549 agtttgaagactgacgttatcaaatcccgtaatcggaagtcatctcatcacgatagtccg 5490
Query: 721 aacgacaagaagaggaaagaccccgctttgctaacaccgaacagttctacaaagaagaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5489 aacgacaagaagaggaaagaccccgctttgctaacaccgaacagttctacaaagaagaaa 5430
Query: 781 aaaaacaatgcttacaatatgaataatgacattgttacacagaatgacaatgcacatcaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5429 aaaaacaatgcttacaatatgaataatgacattgttacacagaatgacaatgcacatcaa 5370
Query: 841 aaccaccaagctcagacytctcagcaatttccgcagccattaacaccccaggtcagttgg 900
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5369 aaccaccaagctcagacttctcagcaatttccgcagccattaacaccccaggtcagttgg 5310
Query: 901 caaagtcaaaatgttgagctctctgaggatatgaagt 937
|||||||||||||||||||||||||||||||||||||
Sbjct: 5309 caaagtcaaaatgttgagctctctgaggatatgaagt 5273
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5564
Number of Sequences: 1807
Number of extensions: 5564
Number of successful extensions: 112
Number of sequences better than 1.0e-20: 1
length of query: 939
length of database: 10,358,551
effective HSP length: 16
effective length of query: 923
effective length of database: 10,329,639
effective search space: 9534256797
effective search space used: 9534256797
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.8 bits)